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Revision 1.16 - (view) (download) - [select for diffs]
Sun Jun 22 15:49:40 2008 UTC (3 months, 2 weeks ago) by aphillippy
Branch: MAIN
CVS Tags: HEAD
Changes since 1.15: +14 -8 lines
Diff to previous 1.15

build compatability fixes

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Revision 1.15 - (view) (download) - [select for diffs]
Thu Oct 26 22:01:21 2006 UTC (23 months, 1 week ago) by mcschatz
Branch: MAIN
CVS Tags: AMOS_2_0_0, AMOS_2_0_1
Changes since 1.14: +16 -2 lines
Diff to previous 1.14

Move files out of bankViewer directory

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Revision 1.14 - (view) (download) - [select for diffs]
Wed Oct 25 16:54:57 2006 UTC (23 months, 1 week ago) by mcschatz
Branch: MAIN
Changes since 1.13: +2 -1 lines
Diff to previous 1.13

Add autoJoiner

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Revision 1.13 - (view) (download) - [select for diffs]
Thu Apr 13 02:18:13 2006 UTC (2 years, 5 months ago) by mcschatz
Branch: MAIN
Changes since 1.12: +3 -0 lines
Diff to previous 1.12

Include zipalign

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Revision 1.12 - (view) (download) - [select for diffs]
Thu Mar 9 21:54:06 2006 UTC (2 years, 6 months ago) by mcschatz
Branch: MAIN
Changes since 1.11: +15 -4 lines
Diff to previous 1.11

Refactor functions in ContigUtils

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Revision 1.11 - (view) (download) - [select for diffs]
Fri Oct 14 18:24:24 2005 UTC (2 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.10: +11 -0 lines
Diff to previous 1.10

Add tool for managing contig bank

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Revision 1.10 - (view) (download) - [select for diffs]
Wed Oct 12 20:52:51 2005 UTC (2 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.9: +11 -0 lines
Diff to previous 1.9

Add tool for stitching together contigs

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Revision 1.9 - (view) (download) - [select for diffs]
Thu Sep 22 18:36:49 2005 UTC (3 years ago) by mschatz
Branch: MAIN
CVS Tags: v1_4_0b
Changes since 1.8: +6 -0 lines
Diff to previous 1.8

Include headers in make dist

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Revision 1.8 - (view) (download) - [select for diffs]
Fri Aug 26 00:56:54 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
Changes since 1.7: +28 -5 lines
Diff to previous 1.7

Initial import of fattenSlice refactoring, right fattening works :)

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Revision 1.7 - (view) (download) - [select for diffs]
Tue Aug 23 18:14:19 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
Changes since 1.6: +18 -18 lines
Diff to previous 1.6

Rename files

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Revision 1.6 - (view) (download) - [select for diffs]
Mon Aug 22 22:42:45 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
Changes since 1.5: +9 -0 lines
Diff to previous 1.5

Add tool for rotating circular contigs

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Revision 1.5 - (view) (download) - [select for diffs]
Thu Aug 18 22:45:34 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
Changes since 1.4: +12 -1 lines
Diff to previous 1.4

Add tool for analyzing snps and mates, and hopefully, split the contig to separate the repeat

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Revision 1.4 - (view) (download) - [select for diffs]
Mon Jul 25 01:40:03 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN
Changes since 1.3: +18 -5 lines
Diff to previous 1.3

stub for new tool to trim contigs

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Revision 1.3 - (view) (download) - [select for diffs]
Sat Jul 9 04:00:52 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN
Changes since 1.2: +10 -1 lines
Diff to previous 1.2

Add tool to add a gap at an arbitrary location

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Revision 1.2 - (view) (download) - [select for diffs]
Fri Jul 8 21:51:40 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN
Changes since 1.1: +4 -2 lines
Diff to previous 1.1

Updates

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Revision 1.1 - (view) (download) - [select for diffs]
Fri Jul 8 20:11:07 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN

First new contig manipulation tool