SourceForge.net

Search

Log of /AMOS/src/bankViewer/TilingFrame.cc

Parent Directory Parent Directory


Links to HEAD: (view) (download)
Sticky Tag:

Revision 1.62 - (view) (download) - [select for diffs]
Mon Jun 23 01:05:56 2008 UTC (3 months, 2 weeks ago) by mcschatz
Branch: MAIN
CVS Tags: HEAD
Changes since 1.61: +2 -0 lines
Diff to previous 1.61
Make search case insensitive

Revision 1.61 - (view) (download) - [select for diffs]
Fri Jun 29 03:11:19 2007 UTC (15 months, 1 week ago) by mcschatz
Branch: MAIN
Changes since 1.60: +1 -1 lines
Diff to previous 1.60
Workaround for Qt 3.1 limitation

Revision 1.60 - (view) (download) - [select for diffs]
Wed Jun 27 02:43:14 2007 UTC (15 months, 1 week ago) by mcschatz
Branch: MAIN
Changes since 1.59: +13 -0 lines
Diff to previous 1.59
Show IID and EID in contig, scaffold views; add dialog to set width of read name

Revision 1.59 - (view) (download) - [select for diffs]
Fri Sep 8 07:26:27 2006 UTC (2 years ago) by mcschatz
Branch: MAIN
CVS Tags: AMOS_2_0_0, AMOS_2_0_1
Changes since 1.58: +2 -2 lines
Diff to previous 1.58
Move Chromatogram loading to separate ChromoStore class

Revision 1.58 - (view) (download) - [select for diffs]
Tue Sep 5 23:39:44 2006 UTC (2 years, 1 month ago) by mcschatz
Branch: MAIN
Changes since 1.57: +23 -8 lines
Diff to previous 1.57
Clicking on work Consensus in the contig view sorts the reads by their eid

Revision 1.57 - (view) (download) - [select for diffs]
Mon May 1 02:38:57 2006 UTC (2 years, 5 months ago) by mcschatz
Branch: MAIN
Changes since 1.56: +4 -15 lines
Diff to previous 1.56
Click on a readname highlights its insert

Revision 1.56 - (view) (download) - [select for diffs]
Thu Apr 27 04:28:59 2006 UTC (2 years, 5 months ago) by mcschatz
Branch: MAIN
Changes since 1.55: +2 -0 lines
Diff to previous 1.55
Massive refactoring to use LaunchPad

Revision 1.55 - (view) (download) - [select for diffs]
Tue Apr 11 21:59:17 2006 UTC (2 years, 5 months ago) by mcschatz
Branch: MAIN
Changes since 1.54: +2 -0 lines
Diff to previous 1.54
Make sure to reload contig range when changing font size

Revision 1.54 - (view) (download) - [select for diffs]
Sat Apr 8 22:06:20 2006 UTC (2 years, 5 months ago) by mcschatz
Branch: MAIN
Changes since 1.53: +16 -2 lines
Diff to previous 1.53
Support fractional per-base display width

Revision 1.53 - (view) (download) - [select for diffs]
Tue Apr 4 22:40:37 2006 UTC (2 years, 6 months ago) by mcschatz
Branch: MAIN
Changes since 1.52: +1 -1 lines
Diff to previous 1.52
Replace RenderSeq::TileOrderCmp with standard AMOS TileOrderCmp

Revision 1.52 - (view) (download) - [select for diffs]
Sat Mar 11 07:56:58 2006 UTC (2 years, 6 months ago) by mcschatz
Branch: MAIN
Changes since 1.51: +31 -4 lines
Diff to previous 1.51
Add toggle between gapped/ungapped coordinates, needs work

Revision 1.51 - (view) (download) - [select for diffs]
Tue Feb 14 22:35:17 2006 UTC (2 years, 7 months ago) by mcschatz
Branch: MAIN
Changes since 1.50: +1 -1 lines
Diff to previous 1.50
Finalize scaffold features

Revision 1.50 - (view) (download) - [select for diffs]
Wed Feb 1 23:40:28 2006 UTC (2 years, 8 months ago) by mcschatz
Branch: MAIN
Changes since 1.49: +1 -1 lines
Diff to previous 1.49
Fix for lower case bases

Revision 1.49 - (view) (download) - [select for diffs]
Mon Jan 23 22:44:19 2006 UTC (2 years, 8 months ago) by mcschatz
Branch: MAIN
Changes since 1.48: +4 -1 lines
Diff to previous 1.48
Fix for circular reads

Revision 1.48 - (view) (download) - [select for diffs]
Fri Jan 20 04:26:36 2006 UTC (2 years, 8 months ago) by mcschatz
Branch: MAIN
Changes since 1.47: +5 -2 lines
Diff to previous 1.47
Cleanup some dependencies

Revision 1.47 - (view) (download) - [select for diffs]
Thu Jan 12 19:34:17 2006 UTC (2 years, 8 months ago) by mcschatz
Branch: MAIN
Changes since 1.46: +1 -2 lines
Diff to previous 1.46
Add color by linked contig

Revision 1.46 - (view) (download) - [select for diffs]
Wed Jan 11 23:01:29 2006 UTC (2 years, 8 months ago) by mcschatz
Branch: MAIN
Changes since 1.45: +71 -48 lines
Diff to previous 1.45
Smarter management of rendered sequences

Revision 1.45 - (view) (download) - [select for diffs]
Thu Jan 5 21:44:36 2006 UTC (2 years, 9 months ago) by mcschatz
Branch: MAIN
Changes since 1.44: +19 -4 lines
Diff to previous 1.44
Add support for displaying consensus quality values

Revision 1.44 - (view) (download) - [select for diffs]
Thu Aug 11 21:48:56 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
CVS Tags: v1_4_0b
Changes since 1.43: +3 -0 lines
Diff to previous 1.43
QV Coloring of tiling

Revision 1.43 - (view) (download) - [select for diffs]
Thu Aug 11 18:28:20 2005 UTC (3 years, 1 month ago) by mschatz
Branch: MAIN
Changes since 1.42: +3 -0 lines
Diff to previous 1.42
Add Mihai's polymorphism view

Revision 1.42 - (view) (download) - [select for diffs]
Mon Jul 25 01:39:18 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN
Changes since 1.41: +5 -5 lines
Diff to previous 1.41
Circular contig support

Revision 1.41 - (view) (download) - [select for diffs]
Sat Jul 23 01:34:16 2005 UTC (3 years, 2 months ago) by mschatz
Branch: MAIN
Changes since 1.40: +2 -1 lines
Diff to previous 1.40
Circlular fix

Revision 1.40 - (view) (download) - [select for diffs]
Fri May 20 15:33:57 2005 UTC (3 years, 4 months ago) by mschatz
Branch: MAIN
CVS Tags: v1_3_0, v1_3_1
Changes since 1.39: +1 -0 lines
Diff to previous 1.39
Fix for tiny contigs

Revision 1.39 - (view) (download) - [select for diffs]
Wed May 11 02:19:51 2005 UTC (3 years, 4 months ago) by aphillip
Branch: MAIN
Changes since 1.38: +4 -4 lines
Diff to previous 1.38
qt2 qt3 compat nonsense

Revision 1.38 - (view) (download) - [select for diffs]
Sun May 1 06:13:23 2005 UTC (3 years, 5 months ago) by mschatz
Branch: MAIN
Changes since 1.37: +8 -11 lines
Diff to previous 1.37
Framework for multiple query contigs against single reference

Revision 1.37 - (view) (download) - [select for diffs]
Sat Apr 30 23:55:26 2005 UTC (3 years, 5 months ago) by mschatz
Branch: MAIN
Changes since 1.36: +39 -13 lines
Diff to previous 1.36
Initial reference view

Revision 1.36 - (view) (download) - [select for diffs]
Sat Apr 9 18:05:31 2005 UTC (3 years, 5 months ago) by mschatz
Branch: MAIN
Changes since 1.35: +2 -2 lines
Diff to previous 1.35
Scaffold Painting much better, coverage levels still quirky

Revision 1.35 - (view) (download) - [select for diffs]
Fri Apr 8 03:04:23 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.34: +1 -1 lines
Diff to previous 1.34
Better DataStore with prefetching, insert window cleanups

Revision 1.34 - (view) (download) - [select for diffs]
Thu Mar 31 18:43:29 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.33: +17 -9 lines
Diff to previous 1.33
Bidirectional search, highlight consensus

Revision 1.33 - (view) (download) - [select for diffs]
Thu Mar 31 02:25:30 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.32: +29 -7 lines
Diff to previous 1.32
Add search bar

Revision 1.32 - (view) (download) - [select for diffs]
Fri Mar 25 19:34:36 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.31: +2 -1 lines
Diff to previous 1.31
New colors

Revision 1.31 - (view) (download) - [select for diffs]
Fri Mar 25 19:19:01 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.30: +89 -75 lines
Diff to previous 1.30
SNP Coloring and sorting

Revision 1.30 - (view) (download) - [select for diffs]
Sat Mar 19 20:43:43 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.29: +2 -2 lines
Diff to previous 1.29
Contol chromo locatios, other cleanups

Revision 1.29 - (view) (download) - [select for diffs]
Tue Mar 15 20:48:10 2005 UTC (3 years, 6 months ago) by mschatz
Branch: MAIN
Changes since 1.28: +5 -0 lines
Diff to previous 1.28
Handle stretched and compressed mates separately, add toggle for current discrepancy indicator

Revision 1.28 - (view) (download) - [select for diffs]
Mon Feb 28 18:53:20 2005 UTC (3 years, 7 months ago) by mschatz
Branch: MAIN
Changes since 1.27: +15 -0 lines
Diff to previous 1.27
Add read picker

Revision 1.27 - (view) (download) - [select for diffs]
Thu Feb 24 22:26:40 2005 UTC (3 years, 7 months ago) by mschatz
Branch: MAIN
Changes since 1.26: +5 -0 lines
Diff to previous 1.26
Add option to display outside assembled range

Revision 1.26 - (view) (download) - [select for diffs]
Tue Feb 22 22:01:23 2005 UTC (3 years, 7 months ago) by mschatz
Branch: MAIN
Changes since 1.25: +7 -1 lines
Diff to previous 1.25
Add toggle for base colors

Revision 1.25 - (view) (download) - [select for diffs]
Fri Jan 7 22:00:54 2005 UTC (3 years, 8 months ago) by mschatz
Branch: MAIN
CVS Tags: v1_2_8, v1_2_9
Changes since 1.24: +5 -0 lines
Diff to previous 1.24
Add toggle to show low qv bases in lower case

Revision 1.24 - (view) (download) - [select for diffs]
Thu Jan 6 18:44:41 2005 UTC (3 years, 9 months ago) by mschatz
Branch: MAIN
Changes since 1.23: +1 -1 lines
Diff to previous 1.23
Case difference is not a mismatch

Revision 1.23 - (view) (download) - [select for diffs]
Wed Nov 3 23:33:00 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
CVS Tags: v1_2_7
Changes since 1.22: +24 -96 lines
Diff to previous 1.22
Adding initial datastore

Revision 1.22 - (view) (download) - [select for diffs]
Wed Nov 3 19:01:36 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.21: +3 -17 lines
Diff to previous 1.21
Disconnect inserts from tiling

Revision 1.21 - (view) (download) - [select for diffs]
Wed Nov 3 18:47:19 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.20: +31 -0 lines
Diff to previous 1.20
Create separate ContigPicker, more UI improvements

Revision 1.20 - (view) (download) - [select for diffs]
Tue Nov 2 23:03:04 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.19: +34 -2 lines
Diff to previous 1.19
UI Rework

Revision 1.19 - (view) (download) - [select for diffs]
Thu Oct 28 22:25:08 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.18: +4 -6 lines
Diff to previous 1.18
Only load one version of a bases, quals, lots of cleanups

Revision 1.18 - (view) (download) - [select for diffs]
Wed Oct 27 18:23:14 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.17: +84 -10 lines
Diff to previous 1.17
Add toggle to prefetch chromatograms

Revision 1.17 - (view) (download) - [select for diffs]
Tue Oct 26 22:16:22 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.16: +1 -1 lines
Diff to previous 1.16
Contig picker, lots of updates

Revision 1.16 - (view) (download) - [select for diffs]
Mon Oct 25 23:04:07 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.15: +8 -0 lines
Diff to previous 1.15
Now with clickable inserts

Revision 1.15 - (view) (download) - [select for diffs]
Mon Oct 25 14:49:46 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.14: +5 -2 lines
Diff to previous 1.14
Switch to using QCanvas, gcc3 cleanups

Revision 1.14 - (view) (download) - [select for diffs]
Wed Oct 20 22:48:02 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.13: +13 -2 lines
Diff to previous 1.13
Now with Hean's Assembly Viewer info

Revision 1.13 - (view) (download) - [select for diffs]
Wed Oct 20 02:08:50 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.12: +45 -31 lines
Diff to previous 1.12
Smarter window loading

Revision 1.12 - (view) (download) - [select for diffs]
Mon Oct 18 22:28:11 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.11: +12 -5 lines
Diff to previous 1.11
gindexify

Revision 1.11 - (view) (download) - [select for diffs]
Mon Oct 18 20:34:23 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.10: +0 -1 lines
Diff to previous 1.10
Minor

Revision 1.10 - (view) (download) - [select for diffs]
Mon Oct 18 20:27:46 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.9: +32 -19 lines
Diff to previous 1.9
Load on the fly

Revision 1.9 - (view) (download) - [select for diffs]
Sun Oct 17 23:29:13 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.8: +5 -0 lines
Diff to previous 1.8
display qvs

Revision 1.8 - (view) (download) - [select for diffs]
Thu Oct 14 22:34:19 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.7: +29 -13 lines
Diff to previous 1.7
Now with dots!

Revision 1.7 - (view) (download) - [select for diffs]
Thu Oct 14 15:11:15 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.6: +8 -0 lines
Diff to previous 1.6
Cleanups

Revision 1.6 - (view) (download) - [select for diffs]
Mon Oct 11 20:15:48 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.5: +13 -4 lines
Diff to previous 1.5
updates

Revision 1.5 - (view) (download) - [select for diffs]
Sun Oct 10 16:22:15 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.4: +16 -3 lines
Diff to previous 1.4
tiling works pretty well

Revision 1.4 - (view) (download) - [select for diffs]
Sun Oct 10 00:36:05 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.3: +12 -16 lines
Diff to previous 1.3
All better now

Revision 1.3 - (view) (download) - [select for diffs]
Sat Oct 9 18:16:58 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.2: +17 -11 lines
Diff to previous 1.2
ScrollView hack added

Revision 1.2 - (view) (download) - [select for diffs]
Sat Oct 9 17:56:09 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Changes since 1.1: +7 -6 lines
Diff to previous 1.1
Scroll still broken

Revision 1.1 - (view) (download) - [select for diffs]
Sat Oct 9 17:17:46 2004 UTC (3 years, 11 months ago) by mschatz
Branch: MAIN
Refactored

This form allows you to request diffs between any two revisions of this file. For each of the two "sides" of the diff, select a symbolic revision name using the selection box, or choose 'Use Text Field' and enter a numeric revision.

  Diffs between and
  Type of Diff should be a

Sort log by:

Powered by ViewVC 1.0.5 ViewVC Help